Join our online course on Sex Chromosome Evolution (6–10 Oct) to gain hands-on experience in genomic and transcriptomic analyses.
https://www.physalia-courses.org/courses-workshops/sexchr/
#SexChromosomes #GenomeEvolution #Transcriptomics #ComparativeGenomics
A multi-tissue single-cell expression atlas in cattle
The scope of CattleCA After removing low-quality cells and doublets (Methods, Supplementary Fig. 1 and Supplementary Tables 1…
#NewsBeep #News #US #USA #UnitedStates #UnitedStatesOfAmerica #Genetics #Agriculture #AnimalGeneticsandGenomics #Biomedicine #CancerResearch #Dataprocessing #GeneFunction #general #HumanGenetics #Science #Transcriptomics
https://www.newsbeep.com/us/134393/
Can a single method balance sensitivity and specificity in small RNA annotation across the tree of life?
Class-agnostic annotation of small RNAs balances sensitivity and specificity in diverse organisms. Computational and Structural Biotechnology Journal, DOI: https://doi.org/10.1016/j.csbj.2025.05.045
CSBJ: https://www.csbj.org/
New preprint, with a modest contribution from yours truly, on proteo-transcriptomic changes in the aging mammalian brain.
Comprehensive transcription factor perturbations recapitulate fibroblast transcriptional states
Regev, A. et al. The human cell atlas. eLife 6, e27041 (2017). PubMed PubMed Central Google Schola…
#NewsBeep #News #US #USA #UnitedStates #UnitedStatesOfAmerica #Genetics #Agriculture #AnimalGeneticsandGenomics #Biomedicine #CancerResearch #Functionalgenomics #GeneFunction #Generegulation #general #High-throughputscreening #HumanGenetics #Science #Transcriptomics
https://www.newsbeep.com/us/73692/
Analysis of individual patient pathway coordination in a cross-species single-cell kidney atlas
GBD Chronic Kidney Disease Collaboration Global, regional, and national burden of chro…
#NewsBeep #News #US #USA #UnitedStates #UnitedStatesOfAmerica #Genetics #Agriculture #AnimalGeneticsandGenomics #Biomedicine #CancerResearch #Experimentalmodelsofdisease #GeneFunction #general #HumanGenetics #Science #Software #Therapeutics #Transcriptomics #translationalresearch
https://www.newsbeep.com/us/64989/
Postdoc Position: Evolution and Organization of Ant Olfactory Systems
Johannes Gutenberg University Mainz
PostDoc position @uni Mainz (Germany)
#genomics #transcriptomics to investigate the olfactory system of ants
See the full job description on jobRxiv: https://jobrxiv.org/job/johannes-gutenberg-university-mainz-27778-postdoc-position-evolu...
https://jobrxiv.org/job/johannes-gutenberg-university-mainz-27778-postdoc-position-evolution-and-organization-of-ant-olfactory-systems/?fsp_sid=550
Methods and applications of in vivo CRISPR screening
Auton, A. et al. A global reference for human genetic variation. Nature 526, 68–74 (2015). Google Scholar García-García,…
#NewsBeep #News #US #USA #UnitedStates #UnitedStatesOfAmerica #Genetics #Agriculture #AnimalGeneticsandGenomics #Biomedicine #CancerResearch #CRISPR-Cassystems #Functionalgenomics #GeneFunction #general #High-throughputscreening #HumanGenetics #Science #Transcriptomics
https://www.newsbeep.com/us/46349/
My son, Ronan, who is double-majoring in #biochemistry and #physics, is working at Georgetown University in DC this summer, on a #cancer research internship. His work focuses on #cell-type #deconvolution in spatial #transcriptomics.
I know nothing about biology, but I am assisting him with deconvolution. My MathsTodon friends, have you any guidance to offer, either in mathematics or in biology?
"Scalable image-based visualization and alignment of spatial transcriptomics datasets", by Preibisch et al. 2025 @preibischs
https://www.sciencedirect.com/science/article/pii/S2405471225000973
#transcriptomics #BioimageInformatics
SciTech Chronicles. . . . . . . . .April 2nd, 2025
Landscape #transcriptomics may give insight into what #stresses wild #bees.
#RNA #conservation #AI #genomics #conservation #bumblebees #Bombus #funded_by_USDA #funded_by_us
https://phys.org/news/2025-03-landscape-transcriptomics-insight-stresses-wild.html
Last time teaching Applied Plant Transcriptomics at TU Braunschweig 
Slides & resources: https://github.com/bpucker/AppliedPlantTranscriptomics
#Bioinformatics #Transcriptomics
@PuckerLab
Pipeline release! nf-core/molkart v1.1.0 - 1.1.0 - Resolution Road!
Please see the changelog: https://github.com/nf-core/molkart/releases/tag/1.1.0
Key #genes for #corn #architecture revealed, identifying future #breeding targets.
#agriculture #food-security #genomics #gene_regulation #pleiotropy #transcription_factors #transcriptomics #funded_by_NSF #funded_by_us
https://phys.org/news/2025-03-key-genes-corn-architecture-revealed.html
The #eye is famously a well-accessible extension of the brain. So why not looking into eyes to find out about brain disorders? For #schizophrenia this may become possible as retinal cells are affected. #genomics #transcriptomics https://jamanetwork.com/journals/jamapsychiatry/fullarticle/2829092
Aujourd'hui, Gwenaelle nous partage l'histoire des technologies de transcriptomique : comment faisait-on avant l'ère bénie du séquençage haut débit 
https://bioinfo-fr.net/expression-de-gene-evolution
#bioinfofr #transcriptomics
Interesting opportunity!
A permanent position as an Associate Professor in #Zoology is available
at the #NaturalHistoryMuseum #University of Oslo. #MuseumJobs #EvolutionaryBiology, #comparativegenomics #Transcriptomics #Systematics #populationgenomics
https://www.jobbnorge.no/en/available-jobs/job/268410/associate-professor-in-zoology
deadline February 23rd 2025
A genetic barcoding system lets scientists tag and track cells, making it easier than ever to map gene expression (#transcriptomics) and decode behaviour.
https://elifesciences.org/reviewed-preprints/88334?utm_source=mastodon&utm_medium=social&utm_campaign=organic
Casey Brown was a great scientist and an amazing person. He could always make time to catch up with junior people, give encouragement or just joke about pretty much everything.
Now in his honour some of the leading scientist in #genomics and #complextraits have joint to record the Casey Brown #lectures.
From the basics of human #genetics, to #transcriptomics #epigenetics or #machinelearning for genomics. All free to watch.
https://m.youtube.com/playlist?list=PLlV97eYP56rATGyRK4SSHVXyJjVxPGth_
